BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B10LP1|AL428502
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig300 938 0.0
3x_Contig1343 712 0.0
>3x_Contig300
Length = 1281
Score = 938 bits (473), Expect = 0.0
Identities = 480/481 (99%), Gaps = 1/481 (0%)
Strand = Plus / Plus
Query: 1 gatcttaatagcaagtagaatgcatgactttgagttctttgatgtgctggatgggagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gatcttaatagcaagtagaatgcatgactttgagttctttgatgtgctggatgggagttt 860
Query: 61 tctttccggaaagtgtatcaaatcgagctcggtcatctcgttgtcattttaccgcagtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tctttccggaaagtgtatcaaatcgagctcggtcatctcgttgtcattttaccgcagtat 920
Query: 121 attcctaaacactgtgtaggccctatgggc-agttatcacttgggtaaaaccatactgca 179
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 921 attcctaaacactgtgtaggccctatgggccagttatcacttgggtaaaaccatactgca 980
Query: 180 gacatcttttgtataaaattctctaattacctctatatttcttgtctatgtagtgcgtaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 gacatcttttgtataaaattctctaattacctctatatttcttgtctatgtagtgcgtaa 1040
Query: 240 tttggttaattatcagtgaacaactaactgatttaattcatgaaaatgacatggtcctgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 tttggttaattatcagtgaacaactaactgatttaattcatgaaaatgacatggtcctgt 1100
Query: 300 atcatgatgagttaccttcccccaaacattgtatatcaaatttaggctaaaccgtagttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 atcatgatgagttaccttcccccaaacattgtatatcaaatttaggctaaaccgtagttt 1160
Query: 360 ggtaggaacagtcaatggaaggaaatgttgcgtaaagtttcagttcgtaatacttatgga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 ggtaggaacagtcaatggaaggaaatgttgcgtaaagtttcagttcgtaatacttatgga 1220
Query: 420 tactaatatattaagatttatacttttcaatggtaagaaaatagaaagagatgttaaata 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 tactaatatattaagatttatacttttcaatggtaagaaaatagaaagagatgttaaata 1280
Query: 480 a 480
|
Sbjct: 1281 a 1281
>3x_Contig1343
Length = 6877
Score = 712 bits (359), Expect = 0.0
Identities = 360/361 (99%)
Strand = Plus / Plus
Query: 522 aacaaacggattggattttcgacgtaaaccaaatcgaaggaatcagcagcaccgaaaaca 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacaaacggattggattttcgacgtaaaccaaatcgaaggaatcagcagcaccgaaaaca 60
Query: 582 gccttgtccatcacagaaccgcttggagcagcaatgtacttgacaccggatctaacagct 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccttgtccatcacagaaccgcttggagcagcaatgtacttgacaccggatctaacagct 120
Query: 642 ctgtagacgttatctgggaatgggaagaaagcgtcagaagatagagcaacattggtcaac 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgtagacgttatctgggaatgggaagaaagcgtcagaagatagagcaacattggtcaac 180
Query: 702 ttagacatccacgacttcttttcttcggcagtcaaaggttctggaatagtttcgaatttt 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttagacatccacgacttcttttcttcggcagtcaaaggttctggaatagtttcgaatttt 240
Query: 762 gattcatactctgattttyctggttcttcagttggaatttgaccagtgacgaataaatca 821
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gattcatactctgatttttctggttcttcagttggaatttgaccagtgacgaataaatca 300
Query: 822 atggcattggacttttctggtctcttgacacccttggcccacttgaaacctaggactctt 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atggcattggacttttctggtctcttgacacccttggcccacttgaaacctaggactctt 360
Query: 882 g 882
|
Sbjct: 361 g 361
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6577
Number of Sequences: 1807
Number of extensions: 6577
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 2
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)